CDS

Accession Number TCMCG057C39484
gbkey CDS
Protein Id XP_018445018.1
Location join(5881829..5883195,5883639..5883762,5883843..5884136,5884219..5884421,5884515..5884761)
Gene LOC108816947
GeneID 108816947
Organism Raphanus sativus

Protein

Length 744aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018589516.1
Definition PREDICTED: mechanosensitive ion channel protein 10-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category M
Description ion channel
KEGG_TC 1.A.23.4
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K22048        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000302        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0008381        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009612        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010150        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0015267        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0022803        [VIEW IN EMBL-EBI]
GO:0022836        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034599        [VIEW IN EMBL-EBI]
GO:0034614        [VIEW IN EMBL-EBI]
GO:0036473        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0050982        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090693        [VIEW IN EMBL-EBI]
GO:0097468        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGCTAGTAGCAATGGAATAGCAGAAAGGAAGAGTACGAATGGAGGAAGAGAAGTTGTCATCAATGTTTCCGGCGAGGAACCATCAAGAGTTTCTTTTAAGATGGATTCACCAGAGACCGAGAAAGCAGTGTCCACCAACACCAACAAGAGCTCCTCTCCTGAAACCTCCAAGCAGCTTATTGGTAGCCCTAACAAGCCTCCTAGAGCTCCTCCAAACCACCCGAGCAGCGAAGGTTTAACTCAGAGGAGATCTTTTGCTAGATCGGTTTACTCCAAACCCAAGTCCCGGTTTGTCGAACCATCTACCCCCGTAGACGCAACTAACCTAGAGGGGGAAGTTAAGGAGCCGCTCGGTGCTGTTATTTCCATTAGCAGAGGTTCTCCGAACAACAAATCAACAAGGAGCGCCGGTTCAGCAACGCCGAGCAAAGCAGCCGAGGTGGAGAAAGACGAAGACGAAGAGATCTACAAGAAGGTGAAGCTCAGCAAAGAGATGCGGAGAAGAGTGACCCCACTGACGTTGATAGAGCTAGCTTTCTTTATAGCGGTGTTAAGCTCCCTGGTCGCTAGCTTAACCATCGACGTCCTCAAAACCTACACCATGTGGGGGCTAGAAGTGTGGAAATGGTGCGTGCTCGTGATGGTCACGTTCAGCGGGATGCTGGTGACGAACTGGTTCATGCACCTCGTCGTCTTCCTCATCGAGACCAACTTTCTCCTGAGGAGGAAAGTGCTCTACTTTGTGCACGGGTTGAAGAAGAGCGTGCAAGTCTTCATATGGCTCAGCTTGGTCCTCGTGGCTTGGGTGTTTCTCTTCAACCGCGACGTGCATCGATCCTCTACAGCCACGAAGATCCTCACCGCTATAACACGGACTCTCATCTCCCTCCTCACGGGAGCCTTCCTCTGGCTGGTGAAAACGCTCTTGCTTAAAATCCTGGCGGCGAACTTCAACGTGGTTAACTTCTTCGACAGGATTCAAGAATCTGTTTTCCACCAGTACGTGCTCCAGACGCTCTCCGGTCCTCCGCTTATGGAGGAGGCGGAGAGGGTCGGGCGGGAGCCGAGCACGGGGCATTTGAGTTTCACCAGCGTGGGGAAGAAAGGAACGGTTAAAGGGAAGAAAGTGATTGACATGGGGAAAGTTCATAGGATGAAGCGTGAGAAAGTATCTGCGTGGAATATGAGGGTTCTTGTCGAAGCCGTTAGGACTTCTGGTCTCTCTACGATCTCTGACACGTTGGATGAGACGGCTTACGGTGATGGGAAAGAGCAGGCTGAGAAAGGAGAGATTACTAGTGAGATGGAGGCTTTGGCTGCTGCTTACCATGTCTTTAGAAATGTCGCTCAGCCTCTCTGCAGCTACATAGAGGAAGAAGACCTGCTTAGGTTCATGATTAAAGAAGAGGTTGATCTCGTGTTCCCTTTGTTTGACGGTGCTGCTGAGACCGGGAGAATCACCAGAAAAGCTTTCACAGAATGGGTGGTTAAGGTGTACACTAGCAGGAAAGCTCTAGCACATTCCTTAAACGACACAAAAACAGCGGTTAAGCAGTTAAACAAACTCGTGACAGCGATCTTGATCGTTATTACGATCGTCATTTGGCTGCTGCTACTAGAAGTAGCAACGACCAAAGTTTTGCTGTTCTTCTCCACTCAACTCGTTGCTCTTGCTTTTATAATCGGAAGCACTTGCAAGAACCTCTTTGAGTCCATTGTGTTTGTCTTCGTCATGCATCCTTTTGATGTCGGTGATCGCTGCGTTGTCGACGGTGTCCCGATGCTGGTTGAAGAAATGAATCTGTTAACGACGGTGTTCTTGAAACTCGACAACGAGAAAGTGTATTATCCGAACAGTGTTTTGGCCACGAAACCGATAAGCAACTACTTCAGAAGTCCAGATATGGGAGAAACTGTGGAGTTCTCTATCGCATTTTCAACACCAGTCTCTAAGATTGCACATCTCAAAGAAAGAATCGCTGAGTACTTGGAGCAGAACCCGCAGCATTGGTCACCGATACACACGGTGGTGGTTAAGGAGATAGAGAACATGAACAAGCTGAAGATGGCTCTATACAGCAACCACACCATCACGTTTCAGGAATACAGAGAGAGGAATATCAGAAGAACCGAGCAGTCTTTGGCGATTAAGAAAATGTTGGAGGATCTTCACATCGATTACACTCTCCTTCCTCAACAAGTCCTTCTCACCAAGCTCGACAAAAATTAG
Protein:  
MDASSNGIAERKSTNGGREVVINVSGEEPSRVSFKMDSPETEKAVSTNTNKSSSPETSKQLIGSPNKPPRAPPNHPSSEGLTQRRSFARSVYSKPKSRFVEPSTPVDATNLEGEVKEPLGAVISISRGSPNNKSTRSAGSATPSKAAEVEKDEDEEIYKKVKLSKEMRRRVTPLTLIELAFFIAVLSSLVASLTIDVLKTYTMWGLEVWKWCVLVMVTFSGMLVTNWFMHLVVFLIETNFLLRRKVLYFVHGLKKSVQVFIWLSLVLVAWVFLFNRDVHRSSTATKILTAITRTLISLLTGAFLWLVKTLLLKILAANFNVVNFFDRIQESVFHQYVLQTLSGPPLMEEAERVGREPSTGHLSFTSVGKKGTVKGKKVIDMGKVHRMKREKVSAWNMRVLVEAVRTSGLSTISDTLDETAYGDGKEQAEKGEITSEMEALAAAYHVFRNVAQPLCSYIEEEDLLRFMIKEEVDLVFPLFDGAAETGRITRKAFTEWVVKVYTSRKALAHSLNDTKTAVKQLNKLVTAILIVITIVIWLLLLEVATTKVLLFFSTQLVALAFIIGSTCKNLFESIVFVFVMHPFDVGDRCVVDGVPMLVEEMNLLTTVFLKLDNEKVYYPNSVLATKPISNYFRSPDMGETVEFSIAFSTPVSKIAHLKERIAEYLEQNPQHWSPIHTVVVKEIENMNKLKMALYSNHTITFQEYRERNIRRTEQSLAIKKMLEDLHIDYTLLPQQVLLTKLDKN